119 Harold Varmus J.M. Bishop, The Molecular iology of NA Tumor Viruses: A Physician's Guide, New Eh land Journal of Medic e 303:67 -682, 1980, "Oncogenes", Xientific -+ American 2 6r80,rch 19 2; Varmus, 6 Form and Function of Retroviral Proviruses, Science 21 1982, Weinberg, A Molecular Basis of Cancer, Sci. Amer., Nov. 1 3; e Eherging Genetics of Human Cancer, NEE 309:454309, 1983.pT. Hunter, The Proteins of Oncogenes, -=. Amm. 251:70, Aug. 1984. Marx, J.C. The Case of the Misplaced Gene. Science 218:983-985, 1982. The Molecular Biology of Tumor Viruses, Part 11, DNA Tumor Viruses, 1980; Part IITRNA Tumor Viruses , 1982, Cold Spring Harbor Laboratory. Review of Medical Microbiology, chapter 40. Davis, et ale, Microbiology, Chapter 63. - Cold Spring Harbor Symposium on Quantitative Biology, Vol. 42, 1979. Bunn et al., Clinical course of retrovirus-associated adult T-cell lymphoma in %6'~eh'd#&rus Seminar and/or instructor for further readings. the U.S. New Engl. J. Med. 309:257-264, 1983. %Ad-. % "F-4 'CS- -___c.------ -. - /Wd - 11. Introduction role for viruses in the etiology of most human tumors and biochemical studies suggest that conventional agents are not important in the majority of to these statements -- evidence that hepatitis B vir& is a causative factor in hepatoma, that a human retrovirus may cause a form of T cell leukemia and lymphoma, and that herpes viruses may play some role in a few human cancers -- will be considered in the herpes irus and hepatitis virus lectures and in the seminar on tumor viruses. /k A, - This lecture is intended primarily to acquaint you with the rapid advances now being made in the understanding of how viruses cause cancers in animals other than man and how tumor virology has introduced us to a class of cellular genes, called proto-oncogenes, that appear to be activated In many human tumors of unknown etiology. Whether or not human cancer is virus-related, animal tumor viruses offer an important opportunity to learn how cells work, how their behavior can be altered by a very small number of viral genes, and how cellular genes related to viral genes might be implicated in human cancer. -1tclPvf Y - 111. General Considerations A. Transformation Tumor viruses, by definition, have the capacity to produce tumors upon infection of appropriate animals. In practice, most work with tumor viruses is now conducted in cultured animal cells; in the appropriate cells, tumor viruses generally have the capacity to cause an in vitro analogue of tumor production, referred to as "neoplastic transformation" of cells. tumor viruses involves a stably inherited change in one or more properties of Transformation of cells by -2- cell behavior ; most commonly, such change includes altered morphology (transformed cells look more like tumor cells than like normal cells) and freedom from normal Rrowth restraints (transformed cells, in contrast to normal L ells, will grow in random array to a very high density, without attachment to a solid surface, and at low serum concentration; they will form a nfocusn of piled-up cells, permitting an assay for viral transformation; and they will usually produce tumors when injected into animals). In addition, various biochemical changes (alteration in properties of cell membranes, production of new cellular and viral proteins, reduction of cyclic AMP levels, etc.) may also accompany transformation. As discussed below, a major focus of interest in tumor virology is an understanding of how a single viral gene can produce such a profound effect upon cell behavior. B. DNA and RNA tumor viruses Tumor viruses, like other viruses, are classified according to the nature of their genomes. exhibit a variety of biological effects, but (fortunately for students) the biochemical and structural properties of these viruses all appear very similar. The DNA tumor viruses are more complex, since the major classes of DNA viruses (papova viruses, hepatitis B viruses, adenoviruses, herpesviruses, and pox viruses) all have members which are tumorigenic (see appendix A and Table 1). There are many specific examples of RNA tumor viruses which f DNA TUMOR VIRUSES: GENERAI, PROPERTIES Three size classes: small (DNAsize 3-5 kb )---papovaviruses (SV40, polyana, papillm viruses: other hm and simian isolates) ; hepatitis B viruses (man, modchuck) )--adenoviruses (fm several animal species, e.g., chickens, mnkeys, man) e.g., frogs, chickens, mDnkeys, man); pox viruses (generally pmduce benign tmrs; found in several species) medium (DNA size 40 kb large (DNA Size 100-15Okb) -l+erpesviruses (frcm several animal species, C. lysogeny model Since tumor viruses are able to produce stable alterations in host cells and since those changes appear to be maintained by the activity of viral genes, it is not surprising to learn that tumor virus DNA has the capacity to integrate covalently into the genome of the host cell; thus tumor viruses appear to be at least partially related to lysogenic bacteriophage (Table 2). As in the case of most bacteriophage, the genomes of many tumor viruses appear to pass through a stage in which they are in the form of double stranded DNA circles; this is even true of RNA tumor viruses (see below). There is no evidence that tumor viruses produce repressors of the sort responsible for the maintenance of lysogeny. However, in many cases, there is limited expression of viral genes in cells transformed by tumor viruses. '1 2'1 -2a- TAELE 2. REL~ANCE OF LYSOGENY MODEL TO TUMOR VIROLOGY CIRCULAR LlMITED &DNA VIRAL EXPRE=SSION OF CLASS ExANpI;E GENaME PHASE INTEGRATION REPRESSOR VIWGENES Temperate Larnbaaphase LineardSDNA + + twr ,9740 Circular &DNA + + Mtumor Rmssaraxm LinearssM + + Phase virus VirUS Virus FIGURE 1. ALTERNATIVE CONSEQ~NCES OF SV4O ~~ECTIO~ IN D~FF~~T CEU TYPES MONKEY CELL (African green monkey) sv40 Viral DNA replicated Early and late genes expressed Virus produced No virus produced Cell lysed Cell Transformed Viral DNA integrated "Early" genefsf expressed (T antigen] -3- D. Permissive nonpermissive cells -- DNA tumor viruses, with the exception of some herpes viruses and perhaps hepatitis B viruses, do not normally produce tumors in their natural hosts, and cells from the natural host are generally permissive for virus replication. Ordinarily, DNA tumor viruses only transform cells when some component of the virus or the host cell is defective for replication. Most commonly, transformation by DNA tumor viruses is studied in foreign (or heterologous) host cells which, for generally unknown reasons, are defective in their ability to support viral replication (i.e., are nonpermissivr for that virus). For example (Fig. 1) the DNA tumor virus SV40 (simian virus 40) replicates in monkey cells, produces cytopathic effects (e.g., vacuolization in rhesus monkey cells or lysis in African green monkey cells) but it transforms rodent cells (e.g., mouse, rat, hamster) in which it is unable to replicate. &,..hwoJ -I__ RNA tumor viruses, by contrast, are frequently implicated in cancers in their natural hosts, and they are capable of transforming cells while replicating within them. However, RNA tumor viruses can also transform heterologous host cells in which they are Unable to replicate. In other worcts, -- RNA tumor viruses can transform permissive_ or non-permissive host cells. IV. Properties of RNA Tumor Viruses R us have several unusual characteristics which are not ") considered elsewhere in this course; these characteristics have profound' implications for molecular biology and they have strongly influenced the search for human tumor viruses. Structural and genetic features A* --- -- #I ,e -s have been identified in a wide variety of animals (e.g., viper, fish, birds, rodents, ungulates , cats , and several primates including man) but their biochemical and structural features are highly similar: 1. The viruses are enveloped, leaving infected cells by budding through -/ cytoplasmic membranes and entering cells by interacting with host receptors, as described for several virus classes in lectures on replication. 2. The genome is in the form of two identical subunits of 5-10 thousand bases of single stranded RNA. 3. The virus core contains a virus-coded RNA-directed DNA polymerase ("reverse transcriptase") that converts the RNA genome to double stranded DNA during the virus life cycle. 4. Newly synthesized viral DNA forms a closed circle and is then integrated into host chromosomes by a precise mechanism tht generates a provirus structurally similar to many transposable elements (see previous lecture). The genes of the provi permissive cells a retroviruses. xpressed by host cell machinery. Note th t - ysedfi by 9 stent ly infected -often transformed, 5. Retroviru ion, but many viruses are defective for replication ore of these three genes) -4- 123 and must be complemented by a helper virus that supplies the missing functions in co-infected cells (much as described for defective transducing phages in previous lectures). Many of these replication defective viruses carry a gene that mediates the oncogenic effects of the virus (a viral oncogene, derived from a normal cellular gene; see below). But retroviruses without oncogenes can also produce a variety of tumors and other kinds of pathology (e.g., anemia, osteopetrosis, etc.). 6. The most commonly studied RNA tumor viruses are: avian sarcoma viruses (e.g., Rous sarcoma virus) avian leukosis virus mouse leukemia virus mouse sarcoma virus mouse mammary tumor virus feline leukemia and sarcoma virus s simian sarcoma virus -d- human T cell dj- 7. and retroviral proviruses are thus endogenous to the chromosomes of most if not all species, including man. Some properties of endogenous retroviruses are listed below: e -- - Genetically transmitted in the form of proviruses -- May be induced chemically (see Section V1.C below) -- Often xenotropic (grow well in foreign hosts, poorly -- Occasionally oncogenic (e.g., murine leukemia virus -- Probably present in all vertebrates, including man in species from which they are isolated) and murine mammary tumor virus) but more often not pathogenic V. How do Viruses Transform Cells? The major attraction of tumor viruses as laboratory tools is their capacity to alter cell behavior with very few genes. transformation upon the continued synthesis of the products of these "viral oncogenes" has been shown by the use of temperature sensitive mutants with lesions in these genes (Table 3). The dependence of The genome of the most intensely studied DNA virus, SV-40, is divided into an "early" region (expressed prior to replication of viral DNA) and a "late" region. proteins, and it is not expressed in transformed cells (which do not produce virus, see above 1. The "early" region also contaii&overlapping genes, encoding at least two proteins; genetic studies with viral mutants indicate that one or more of these "early" proteins are necessary for transformation of non-permissive cells and for replication of viral DNA in permissive cells. The "late" region consists of three overlapping genes for coat The best studied RNA tumor virus, Rous 8arcoma virus of chickens, has four genes, only one of which (the viral one gene, called E in Rous sarcoma virus) mediates transformation. DNA, is not required for virus replication; in addition, the gene product transforms permissive as well as non-permissive cells. The product, a This gene, in contrast to the early region of SV40 124 -5- phosphoprotein of 60,000 daltons, has the intriguing capacity to phosphorylate tyrosine residues in certain proteins and it is found mainly in plasma membranes. Furthermore, this gene has been derived from a normal cellular gene, called c-E (see below Section VII). TABLE 3 ExAE.IpLES OF VIW ONCOGENES Simian Virus 40 Rous Sarccana Virus Property src gene ~arly region - (A gene) Size of protein ( s ) ca. 85,000 and ca. 60,000 17,000 -red for viral Yes replication Required for trans- Yes formation No Yes Functions of product DNA binding (stk Protein kinase (@os- lates DNA synthesis) phorylates tyrosine ATPase residues) (mainly) (Others) mation of product Primarily nuclear Plasma mn-brane lar homlogue No Yes (see section in at least some cases, but the effect the translocations upon the neoplastic process has yet to be defined. J (b) Amplification has been shown to occur in several types of tumors, affecting several oncogenes (Table 7). generally be seen during karyotyping as a homogeneously staining region within a chromosome or as multiple, small chromosomes lacking a centromere (double minute chromosomes). in oncogene expression. human cancers (e.g., N-E in neuroblastomas) and may be useful in diagnosis. The amplified unit is large and can The increase in gene dosage is generally matched by an increment Amplification sometimes correlates with the staging of -- TABLE 7. CELLULAR GENES IMPLICATED IN NON-VIRAL HUMAN AND MURINE TUMORS BY REARRANGEMENTS ----- Gene - Tumor -- Alteration C-!w Burkitt 's lymphoma Translocations C-fi Myeloid leukemia Translocation Plasmacytoma (Ph,iladelphia chromosome) C-m Myeloid leukemia Amp 1 i f i cation Apudoma Small cell lung carcinoma c-Ki-~ Adrenocortical Ca Ampli f i ca t ion N4lU Neuroblastomas Amplification i2-3 Retinoblasto s More than one of these var sometimes found within the same tumor cell. This is consistent with the generally accepted notion that full fledged cancer cells arise as a result of A major goal of contemporary cancer research is the explicit se several steps in the genesis of a cancer. P-uAUe4c mu ations that affect cellular oncogenes are The general implication of these several findings is that tumor viruses (in ticular, retroviruses) may have led investigators to recognize a class of normal cellular genes (%ellular oncogenes") that may be involved in cancers initiated by various infectious, chemical, physical, or genetic mechanisms. Therefore, the normal functions of these genes, the kinds of changes they suffer during tumorigenesis, and the properties that make them oncogenic under certain circumstances are all matters of extraordinary interest to oncologists. As viewed in Table 8, these genes can be thought to have undergone a variety of "activating" events: transduction to become a viral oncogene, point mutation to produce a gene that transforms cultured cells; or insertion mutation, amplification, or translocation that affect gene expression. Lastly, in vitro, 130 - 10 - r NORPlAL CELLULAR ONCOGENES some of these genes can be made oncogenic by addition of strong regulatory TRANSDUCTION --e RETROVI RAL ONCOGENE Signals o + AMPLIFIED GENE .) TRANSLOCATED GENE REARRANGEMENTS I L TABLE 8. \ IN VITRO b OVEREXPRESSED GENE ElAN I PULAT I ON Appendix A. Additional Historical Information About DNA Tumor Viruses Pa ova viruses ---viruses with small, circular (double-stranded) DNA genomes &.T-mase pairs); "papova" derived from common members of this group: Papilloma viruses (from several natural hosts); Polyoma virus of mice; and Zcuolating viruses (causes vacuole formation ups infection of natural hosts 1 which simian virus 40 (SV 40) is most famous example. therefore not well studied. Polyoma virus ---common in wild mice in which the virus occasionally produces a variety of types of tumor (hence *cpolyn "oma," or many tumors); in cell culture, undergoes lytic, replicative cycle in its natural host (mouse) and transforms certain heterologous, nonpermissive hosts (e.g., hamster). SV 40 ---discovered in rhesus monkey cells during development of polio vaccine; causes tumors in and transforms cells from certain heterologous, nonpermissive cells. /-- hosts (e.g., mouse and other rodents); undergoes replicative cycle in monkey Hepatitis Etype viruses ---discovered first in man (see hepatitis lectures), later in woodchucks, ground squirrels, and ducks; associated with hepatocellular carcinomas in man and woodchucks; inability to grow virus in tissue culture has slowed study of its replication and oncogenicity. - 11 - Adenoviruses ---viruses with medium-sized , linear (double-stranded (ca. 35-40 kilobase pairs); found in many species, including man; the several human types show low, medium, or high oncogenlcity when used to infect newborn rodents (especially hamsters) or rodent cells in culture (these are nonpermissive, heterologous hosts) ; replicate in cells from natural host (man) and cause mild, acute GI and respiratory illness (see lectures on respiratory infections) o DNA genomes Herpes viruses ---enveloped viruses with large, linear (double-stranded) DNA genome (ca. 150 kilobase pairs); associated with a varlety of diseases, including tumors, in the several hosts in which these viruses have been found (e.g., chicken, frog, subhuman primates, and man); evidence for oncogenicity in man is not conclusive; virus replicates in cells from natural host, and, after irradiation to damage replication genes, it can transform certain heterologous host cells in culture (see herpes virus lecture). Epstein-Barr virus (EBV) ---a herpes-like virus originally found in cells from African patient with Burkitt's lymphoma; now commonly seen in human lymphocytes from normal as well as diseased persons; it is the causative agent of infectious mononucleosis and has been indirectly implicated in causation of African Burkitt's lymphoma and nasopharyngeal carcinoma (see herpes virus lecture). 131 FIGURE 4. THE DOMINANT P, R DIGM NORMAL CELLS --==-> CANCER CELLS ONCOGENE (SI MUTATION (S I BASE CHANGES REARRANGEMENTS PROTO-ONCOGENES 1 INAPPROPRIATE AMOUNTS OR ALTERED KINDS OF REGULATORY PROTEINS J, NORMAL REGULATORS OF GROWTH